Allow me to be spefici (since I've had this kicking around as well...)
How tolerant is your hydrogen generation system of impurities in the water? Why do you filter, since most electrolysis I've seen requires some sort of ion donor (usually common salt) to make the water conductive?
Fuel generation and storage - do you do your electrolysis at home or in the vehicle - or do you use some other process than electrolysis? Do you generate enough fuel to run the engine with your process, or is some storage required - and how?
Combustion/Ignition - how do you fire up the fuel, and what is your burn ratio? Do you combust in the presence of pure oxygen (as generated by electrolysis) or in ambient air? What sort of CR do you need, and what pressures are generated and retained by the head, block, and head gasket? Is oringing of the cylinder head required for an effective combustion seal? How about combustion heat?
Fuel metering? Can you still use a variation of the fuel injection system, or do you use a system similar to that used for LPG? Details, please.
Exhaust system - do you have problems with rusting, or do you handle this with the use of CRES or aluminised steel? The principal byproduct of hydrogen combustion is, of course, water. This will condense and cause trouble if you don't do something about it...
How do you handle the energy requirements of the electrolysis process vis-a-vis the typical automotive electrical system, and do you experience an energy deficit or an energy surplus?
I'm pretty openminded, but I do require a certain amount of information upon which to base a decision...
5-90