I aligned the marks PERFECTLY, and i got a 15 pin count when I followed the manual. After we tried to start it and got flames I figured it was one-turn off. So I dissassembled it and rotated the crank one full turn clockwise until NO1 cylinder was again at TDC, Then re-assembled it with the marks perfectly aligned again and got the EXACT same results. So maybe that wasn't my problem to begin with? I will double check the ignition timing tonight after work.
One more thought, after I rotated crank one turn and put timing chain on.. I didn't count the pins as I did the first time, So maybe its 180 off NOW and was fine before and that wasn't even the problem from the start.