Back when I still ran a factory air box... I took vacuum measurements to see if there were any restrictions. Wound up enlarging the front inlet a bit as well as using a K&N. These days, all that is gone and I run an open element setup.
If memory serves, on the early XJs there is some sort of baffle in the tube to the TB that can be removed to improve flow.
Vacuum procedure:
1) Install a vacuum gauge connected to the intake manifold and run the engine, under load, to red line.
2) Note the vacuum reading. This is the system residual.
If the residual vacuum is less than 3"Hg, do nothing. If it is greater, then there is a flow restriction. The restriction can be found by disconnecting parts of the air delivery system, one at a time, and retaking the measurement. Once you have found the restriction, it is relatively easy to resolve the issue at hand depending on what/where it is.
In the case of my '98, the TB was the restriction...
So I replaced it. With an F&B 68mm.
Theory for a normally aspirated engine:
At WOT, the manifold should be at atmospheric pressure. What we call vacuum is a relative pressure reading, not an absolute pressure. To wit, the absolute pressure in the manifold is less than atmospheric absolute pressure so, the gauge registers "vacuum" as a method or reporting the pressure differential.