FYI, the factory trailer harness plugs into the main harness (where the rear lamps would plug in) and the lamp harness plugs into it. I wired my JCR boxes with amber turn signals and no b/u lights. I spent a few hours trying to figure out why my amber t/s lights came on with the brake lights. I'm not sure how it works, but once I took the trailer harness out of the loop, all works as it should. Except now I have no trailer lights..
The trailer harness has two small relays wired into it. I haven't figured out how or why yet, but they must do the same thing as the Tow Ready converter does, and convert separate amber t/s into combined brake/turn signals for the trailer part. I suspect that the LED's are to blame for confusing things.
I guess I need a Tow Ready anyhow, except I actually need it for my trailer lights!