Some progress made and some pics;
-136 amp Alternator upgrade
-oil filter adapter O-ring set
-Mobil 1 oil change and Mobil 1 filter
-swapped rear axle from the 97 to the 01, (no more noise, also came with new brakes the old axle brake pads fell off upon removal of the drum)
-found and replaced burnt cps wires on main harness (it turns out that burning smell, was in-fact, burning wires, go figure)
-replaced fuel pump and filters (the old one was covered in mud and had low pressure)
-replaced downstream 02 sensor, i was getting the p0138 after about 200 miles of driving
and yesterday i pulled the roof rack off and dropped it off at Macco to get the roof top and cowl ends refinished and painted, should be back today or tomorrow